Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3489067	3489076	10	66 [0]	[0] 39	yijO	predicted DNA‑binding transcriptional regulator

ACGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGACC  >  W3110S.gb/3489007‑3489066                                                            | aCGAATACCTGAATCACCCGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:742717/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:579838/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:707910/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:689640/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:686793/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:653521/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:651693/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:641283/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:584662/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:770035/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:561620/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:526729/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:517201/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:477492/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:459764/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:427551/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1045624/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:384812/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:792200/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:800928/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:805220/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:823621/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:838783/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:839708/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:845205/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:862311/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:867640/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:874156/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:906355/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:937082/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:962972/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:967308/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:977882/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1185863/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1437227/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1419706/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1397758/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1384422/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1344945/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1251971/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1238403/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1211527/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1441880/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1172049/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1142472/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1111186/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1098253/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1063698/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1052867/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1048368/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:335199/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:1448535/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:150907/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:164714/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:183832/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:187446/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:190659/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:204581/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:215836/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:239606/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:259324/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:304649/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:311617/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:325108/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGAcc  >  1:328617/1‑60 (MQ=255) aCGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTCAAAGGCTATGAcc  >  1:613521/1‑60 (MQ=255)                                                            | ACGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGACC  >  W3110S.gb/3489007‑3489066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑