Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3524037	3524050	14	7 [0]	[0] 26	yiiR	conserved inner membrane protein

CCATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAC  >  W3110S.gb/3523978‑3524036                                                           | ccATATTTATTTTCGCCTTGTGTGCGAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:1226742/59‑1 (MQ=255) ccATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:1214322/59‑1 (MQ=255) ccATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:427486/59‑1 (MQ=255) ccATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:560257/59‑1 (MQ=255) ccATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:721838/59‑1 (MQ=255) ccATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:877377/59‑1 (MQ=255)  cATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAc  <  1:606919/58‑1 (MQ=255)                                                           | CCATATTTATTTTCGCCTTGTGTGCCAACAAACGCACCAAGATCGATAAGCATCATCAC  >  W3110S.gb/3523978‑3524036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑