Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3590703	3590736	34	34 [0]	[0] 57	yihG	predicted endonuclease

GTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAC  >  W3110S.gb/3590656‑3590702                                               | gTTTCACGCAAGAAAAACATCATCAAACCCACTCCACTTTTCAAAAc  <  1:164271/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:305526/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1357662/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1451565/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:162417/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:206609/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:210562/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:244811/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:261729/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1345867/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:402858/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:43383/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:67722/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:731689/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:741788/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:904667/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:996844/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1184771/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1049958/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1065827/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1085309/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1104470/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1119728/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1149230/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1160951/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1162593/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1032677/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:120379/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1234314/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1260483/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1272133/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1299990/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1304611/47‑1 (MQ=255) gTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAc  <  1:1341399/47‑1 (MQ=255)                                               | GTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAAC  >  W3110S.gb/3590656‑3590702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑