Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3660138	3660142	5	35 [0]	[0] 4	wzxE	O‑antigen translocase

AATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAA  >  W3110S.gb/3660078‑3660137                                                            | aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGTGCCATCAGCGTAGAGaaa  >  1:946342/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:591312/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:268822/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:395640/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:471884/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:50920/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:533084/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:543160/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:558699/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:578955/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:253025/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:648965/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:671728/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:719822/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:733260/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:87518/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:90104/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:980669/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1362893/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1196109/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1224084/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:124738/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1264003/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1279841/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1295800/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1298312/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1360575/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1012014/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1374029/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1428895/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:1467983/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:175723/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:181543/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:202621/1‑60 (MQ=255) aaTCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGaaa  >  1:207857/1‑60 (MQ=255)                                                            | AATCCCTGGCTGATTGGCGCAGCTGCCAGCACAAAAACCAGCGCCATCAGCGTAGAGAAA  >  W3110S.gb/3660078‑3660137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑