Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3676470	3676477	8	45 [3]	[0] 5	yifO	conserved hypothetical protein

CATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGTT  >  W3110S.gb/3676408‑3676474                                                              |      cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:662145/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:332398/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:391918/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:39805/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:42627/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:475051/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:519610/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:527965/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:591502/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:607448/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:622438/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:6557/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:290802/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:669741/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:709382/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:752832/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:780541/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:782115/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:851924/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:893528/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:928195/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:959433/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:984872/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1183455/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1021038/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1022122/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1041513/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1047471/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1124396/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1157974/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1158846/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1163860/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1020123/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1196551/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1267313/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1282001/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1345949/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1350274/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:1417594/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:190389/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:258995/1‑62 (MQ=255) cATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTa       >  1:283260/1‑62 (MQ=255)       cAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGtt  <  1:1071141/61‑1 (MQ=255)       cAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGtt  <  1:23970/61‑1 (MQ=255)        aaCCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGtt  <  1:114801/60‑1 (MQ=255)                                                              |      CATTATCAACCACTCGCGACCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGTT  >  W3110S.gb/3676408‑3676474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑