Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3745886	3746076	191	28 [0]	[0] 8	mdtL	multidrug efflux system protein

CTCGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGA  >  W3110S.gb/3745825‑3745885                                                             | ctcGTGGTTTATCCGAAGCTGCGGTGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:385385/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:372947/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:831441/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:830653/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:822098/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:809428/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:746217/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:690818/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:630175/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:598592/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:528860/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:471764/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1036102/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:348939/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:342965/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:298407/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:183846/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1434272/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1388687/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1328576/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1252263/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1235550/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1194932/61‑1 (MQ=255) ctcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1188218/61‑1 (MQ=255) ctcGTGGGTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:466929/61‑1 (MQ=255) ctcGGGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:1447260/61‑1 (MQ=255)  tcGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGa  <  1:220136/60‑1 (MQ=255)             ccGAAGCTGCGGGGGCCGCTGTGCGCGTTTCTTTTAAAATAAAAAAAGa  <  1:709422/49‑1 (MQ=39)                                                             | CTCGTGGTTTATCCGAAGCTGCGGGGGCCGCTGGGCGCGTTTCTTTTAAAATAAACAAAGA  >  W3110S.gb/3745825‑3745885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑