Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3816509	3816834	326	34 [0]	[0] 13	spoT	bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase

CGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCGG  >  W3110S.gb/3816454‑3816508                                                       | cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:442464/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:94962/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:82207/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:813743/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:797434/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:777754/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:716690/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:709566/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:682345/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:66693/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:627069/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:625426/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:613336/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:562903/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:554231/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1048123/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:411074/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1123082/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1240985/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1393994/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:221256/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:222970/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:304549/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:31749/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:325064/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:342366/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:404955/55‑1 (MQ=255) cGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:430978/55‑1 (MQ=255) cGTCAAGCCTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1106508/55‑1 (MQ=255) cGTCAAGCATTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:1349031/55‑1 (MQ=255)  gTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:275686/54‑1 (MQ=255)  gTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:124805/54‑1 (MQ=255)  gTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:825552/54‑1 (MQ=255)             ccAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCgg  <  1:619117/43‑1 (MQ=255)                                                       | CGTCAAGCGTTGCCAGCTTCATGCGATCCAGCTCGCGCTGAATATTTTCCTGCGG  >  W3110S.gb/3816454‑3816508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑