Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3824064	3824130	67	40 [0]	[0] 55	rph	ECK3633:JW3618:b3643; ribonuclease PH

AGGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCATGC  >  W3110S.gb/3824002‑3824063                                                              | agGCGTGCCGCGCTTCCTGAATGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1247381/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGTCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1347295/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:714866/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:260113/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:387475/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:388251/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:451011/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:456728/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:618338/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:635181/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:674365/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:708748/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:196039/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:719851/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:737185/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:763187/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:794088/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:855332/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:870319/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:870590/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:996906/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1325578/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1046341/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1092868/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:110540/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1144777/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:123562/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1240111/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1293426/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1295947/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:225513/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1373766/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:138061/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1391021/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1432250/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1465967/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:164614/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:165393/1‑62 (MQ=255) agGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1005908/1‑62 (MQ=255) agGCGTGCCGCGCTTACTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCAtgc  >  1:1070019/1‑62 (MQ=255)                                                              | AGGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCATGC  >  W3110S.gb/3824002‑3824063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑