Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3844258	3844537	280	64 [0]	[0] 47	[rfaC]–[rfaF]	[rfaC],[rfaF]

CGCTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGC  >  W3110S.gb/3844196‑3844257                                                              | cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:462095/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:233647/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:242878/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:28357/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:284197/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:296119/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:312213/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:365062/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:375972/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:376502/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:428219/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:442555/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:44554/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:449488/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:458418/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:460620/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:22160/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:547465/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:552937/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:569121/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:573815/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:581258/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:644435/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:670714/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:69654/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:732186/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:74142/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:780566/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:877076/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:923868/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:98106/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:989536/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1306258/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1104891/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1110718/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1121964/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:112499/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1138641/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1148457/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1165761/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1172310/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1199763/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1219458/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1220423/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1228980/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1274108/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1280266/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1294046/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1071232/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:130927/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1326517/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1391141/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1401104/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:14024/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1404981/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1442731/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1450919/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1459324/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:157266/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:172655/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:175561/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:196301/1‑62 (MQ=255) cgcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:2213/1‑62 (MQ=255) agcTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGc  >  1:1330453/2‑62 (MQ=255)                                                              | CGCTTCACGAAACGCTTTGCGTTCCGCTTTTATGGGGGCCGAGAACCAGGCTTTACGCCAGC  >  W3110S.gb/3844196‑3844257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑