Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3845453	3845532	80	12 [0]	[0] 18	[rfaF]–[rfaD]	[rfaF],[rfaD]

TTATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTC  >  W3110S.gb/3845392‑3845452                                                             | ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACTTCATCATGTc  >  1:1342987/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:1013531/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:1017312/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:11040/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:1175074/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:229750/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:249982/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:462812/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:564186/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:835100/1‑61 (MQ=255) ttATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:89344/1‑61 (MQ=255) ttATCGCCTGGGGATAGAGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTc  >  1:264199/1‑61 (MQ=255)                                                             | TTATCGCCTGGGGATAGCGCGCCTGGAGCGTGCGATAGAGACTTTGCGACATCATCATGTC  >  W3110S.gb/3845392‑3845452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑