Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3868010	3868024	15	50 [0]	[0] 13	mtlA	fused mannitol‑specific PTS enzyme IIABC components

AGCAGCGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTA  >  W3110S.gb/3867949‑3868009                                                             | agcagcGGCAGGAGATAAGTGATCATCGGCCCGCCCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:56477/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCGAGCGTCTCGTTCGGTa  >  1:372580/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:612926/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:100878/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:35852/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:399131/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:420595/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:421146/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:42316/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:436075/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:490083/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:556701/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:274723/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:6220/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:634357/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:641502/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:697374/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:718278/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:779691/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:802756/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:819821/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:86642/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:967287/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:997599/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1258748/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1020031/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1032804/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1110771/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1113361/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1117552/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1135496/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1182745/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1223773/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1227832/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1232929/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:266625/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1264486/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1286720/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1351383/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1355966/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1358603/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:1377249/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:14863/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:190990/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:194151/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:242504/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:245372/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGCCCGACCACCTTCGCCAGCGTCTCGTTCGGTa  >  1:732991/1‑61 (MQ=255) agcagcGGCAGGAGATAAGTGATCATCGGACCGACCAGATTCGCCAGCGTCTCGTTCGGTa  >  1:730999/1‑61 (MQ=255) agcagaGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTa  >  1:142253/1‑61 (MQ=255)                                                             | AGCAGCGGCAGGAGATAAGTGATCATCGGCCCGACCAGCTTCGCCAGCGTCTCGTTCGGTA  >  W3110S.gb/3867949‑3868009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑