Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3942081	3942104	24	39 [0]	[0] 15	bcsG	predicted inner membrane protein

CTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGAA  >  W3110S.gb/3942019‑3942080                                                              | cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACCCCAAATTGAGGAGCGGATGGaa  <  1:651158/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:68149/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:426968/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:450820/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:469856/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:562058/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:572709/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:63341/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:649458/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:651116/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1111633/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:708433/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:712402/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:785867/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:821917/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:832494/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:908634/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:920194/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:957474/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:974080/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1333278/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1017604/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1132974/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1151351/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1192534/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1203323/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1238200/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1254050/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1330370/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1352451/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1355638/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1458161/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:17613/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:230728/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:273754/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGCAGCGGATGGaa  <  1:266527/62‑1 (MQ=255) cTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACAAAATTGAGGAGCGGATGGaa  <  1:324707/62‑1 (MQ=255)  tGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1336457/61‑1 (MQ=255)  tGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGaa  <  1:1233962/61‑1 (MQ=255)                                                              | CTGTAGCGCGGAAGGGGCATCAGCAGAAACGCGGCAAACACCAAATTGAGGAGCGGATGGAA  >  W3110S.gb/3942019‑3942080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑