Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3964738	3965100	363	58 [0]	[0] 17	yhjE	predicted transporter

ACGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAT  >  W3110S.gb/3964678‑3964737                                                            | aCGGCTACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:795808/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAGCCAAt  <  1:996451/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:736146/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:367568/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:405738/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:406693/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:49289/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:547625/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:56490/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:606727/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:629174/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:669778/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:687408/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:71170/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:727776/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:729847/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1027482/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:739166/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:801578/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:805311/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:847553/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:872653/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:882663/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:932001/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:932267/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:964037/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:978690/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:997335/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:125002/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:10020/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1037888/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1043427/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1045966/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1093248/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1095386/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1098010/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:110199/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1175069/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1175583/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1189425/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:119424/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1247707/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:359160/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1265168/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1266909/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1271651/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1280898/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:135554/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1400132/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:1468216/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:280896/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:290497/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:301685/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:316943/60‑1 (MQ=255) aCGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:35693/60‑1 (MQ=255)  cGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:781761/59‑1 (MQ=255)           aaGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:3883/50‑1 (MQ=255)                          aaTCCAGCGACTGGCACCATCACGCCAAAACCAAt  <  1:717723/35‑1 (MQ=255)                                                            | ACGGCGACCAAAGGCATCAGCCAGTAATCCAGCGACTGGCACCATCACGCCAAAACCAAT  >  W3110S.gb/3964678‑3964737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑