Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3966620	3966687	68	35 [0]	[0] 18	yhjD	conserved inner membrane protein

ATCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATAAA  >  W3110S.gb/3966558‑3966619                                                              | aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:325028/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:984171/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:978341/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:942101/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:841776/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:829563/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:773232/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:764476/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:669343/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:659091/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:59501/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:576561/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:57164/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:558177/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:549465/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1014952/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1267241/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1027950/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1032816/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1056127/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1063510/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1240630/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1247958/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1402091/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1422316/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1468803/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:168836/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:240033/62‑1 (MQ=255) aTCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:253849/62‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:611716/61‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1277974/61‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:280828/61‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:695571/61‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:1137166/61‑1 (MQ=255)  tCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATaaa  <  1:961881/61‑1 (MQ=255)                                                              | ATCGCGCGACTGGGCACGAATCGCTTCACGCAGGTTACCCATCCAGTTGATGCCGGAATAAA  >  W3110S.gb/3966558‑3966619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑