Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3969903	3970044	142	32 [0]	[0] 74	treF	cytoplasmic trehalase

ATCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTGGGCGGG  >  W3110S.gb/3969848‑3969902                                                       | aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:23500/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:955302/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:898638/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:82868/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:827617/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:747030/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:716440/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:707512/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:684641/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:628746/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:605549/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:545460/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:398943/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:316291/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:292460/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:280438/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1038424/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:152472/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1402429/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1385528/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1377073/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1359468/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1354044/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1323397/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1319089/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1239791/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1237991/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:115994/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1152272/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1087806/55‑1 (MQ=255) aTCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1041154/55‑1 (MQ=255)  tCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTgggcggg  <  1:1079568/54‑1 (MQ=255)                                                       | ATCCCAACCGGAGGCCGCCCCCGCGCGTAAATCGCGGTACACCTCGTTGGGCGGG  >  W3110S.gb/3969848‑3969902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑