Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 3970623 3971051 429 4 [3] [0] 49 [treF] [treF]

TCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGCCG  >  W3110S.gb/3970587‑3970623
                                   | 
tCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGcc   >  1:1176055/1‑36 (MQ=255)
tCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGCCg  >  1:1066265/1‑37 (MQ=255)
tCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGCCg  >  1:1456888/1‑37 (MQ=255)
tCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGCCg  >  1:188877/1‑37 (MQ=255)
                                   | 
TCGGGAAAGGTTTTACTGTCGGGGAAAATTTTCGCCG  >  W3110S.gb/3970587‑3970623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: