Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3994963	3995224	262	44 [0]	[0] 16	[yhiR]	[yhiR]

GAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCA  >  W3110S.gb/3994922‑3994962                                         | gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:545829/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:102390/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:285592/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:287985/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:309077/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:333472/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:435983/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:440477/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:444121/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:458478/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:469910/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:275528/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:603157/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:662299/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:697618/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:71013/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:71320/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:772980/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:824477/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:846051/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:879147/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1286801/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1041584/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1047210/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1064042/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1099872/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1108361/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1205806/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1245067/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1249876/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1269618/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:230838/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1316506/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1316613/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1329428/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:136345/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1387946/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1403286/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1462382/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:150330/41‑1 (MQ=255) gagaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:221932/41‑1 (MQ=255)  agaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:580053/40‑1 (MQ=255)  agaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:442589/40‑1 (MQ=255)   gaAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCa  <  1:1134138/39‑1 (MQ=255)                                         | GAGAAACGGTTTATCTTTCTCTTTCAGCGACTCGATGATCA  >  W3110S.gb/3994922‑3994962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑