Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4000289	4000299	11	37 [0]	[0] 5	uspA	universal stress global response regulator

CTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATGAG  >  W3110S.gb/4000240‑4000288                                                 | cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:608129/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:330738/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:334125/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:394498/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:405482/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:425510/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:426275/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:499009/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:517344/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:558233/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:188904/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:679847/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:688299/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:783273/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:79938/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:910829/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:934163/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:965930/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:973896/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1260279/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1046960/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1091217/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1144181/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1161329/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1171892/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1176788/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:121424/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1216655/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1008226/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1283965/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:129123/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:130932/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1352850/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1356586/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1415828/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:1455636/1‑49 (MQ=255) cTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATgag  >  1:180556/1‑49 (MQ=255)                                                 | CTTTCTCTACCAGAACTTTGCTTTCCGGGGAGAGGTCGACCGCGATGAG  >  W3110S.gb/4000240‑4000288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑