Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4059233	4059316	84	60 [0]	[0] 27	[yhhY]	[yhhY]

AAGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATG  >  W3110S.gb/4059171‑4059232                                                              | aaGGTTGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:873948/62‑1 (MQ=255) aaGGATGAGGCTCCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTTCCTGATg  <  1:1069319/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTTCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:61739/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:685833/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1010599/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:373842/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:38398/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:45550/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:478296/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:496161/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:498380/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:505425/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:536756/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:561240/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:626379/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:626612/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:665668/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:372751/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:690455/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:692174/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:693704/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:714075/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:723444/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:730435/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:788436/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:911691/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:912459/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:913013/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:918906/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:960678/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1239216/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1037290/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1049936/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:106036/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:109976/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1134397/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1157854/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1160577/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1185041/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1185918/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1208710/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1210688/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:335327/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1241540/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1296772/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1347685/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1360493/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1369977/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1410882/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1439956/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:1440528/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:144190/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:157560/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:160332/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:205833/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:249207/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:257696/62‑1 (MQ=255) aaGGATGAGGCACCTGTAGTGTGTTGCAATACACCACCGGCTGGGCGTGAATCTGCCTGATg  <  1:1195837/62‑1 (MQ=255) aaGGATGAGGCACATGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:781881/62‑1 (MQ=255)   ggATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATg  <  1:889369/60‑1 (MQ=255)                                                              | AAGGATGAGGCACCTGTAGTGTGTTGCAATACACCTCCGGCTGGGCGTGAATCTGCCTGATG  >  W3110S.gb/4059171‑4059232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑