Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4159766	4159770	5	63 [0]	[0] 8	kefG	component of potassium effux complex with KefB

ATTATTTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGC  >  W3110S.gb/4159710‑4159765                                                        | attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:676691/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:306329/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:324247/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1040782/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:357635/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:367181/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:396214/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:406425/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:448588/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:531304/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:546234/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:588845/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:589594/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:606204/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:626911/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:331130/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:684569/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:731007/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:758563/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:766274/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:774271/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:790971/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:81483/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:895848/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:90212/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:941325/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:948473/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:959797/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:986101/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1377259/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1051438/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1076677/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:11902/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:120086/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1213653/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:123078/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1255339/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1320932/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1339035/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1347875/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1372523/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:292175/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1379291/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1411730/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:268488/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:249160/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:240641/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:227747/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:207248/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:196310/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:178012/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:175258/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:146930/56‑1 (MQ=255) attattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1382004/56‑1 (MQ=255)  ttattTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1064206/55‑1 (MQ=255)  ttattTACTGGGCGAGACGCCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:412073/55‑1 (MQ=255)             gCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:373031/44‑1 (MQ=255)                 gaCGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1233346/40‑1 (MQ=255)                  aCGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:555841/39‑1 (MQ=255)                     gCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:751978/36‑1 (MQ=255)                     gCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:883431/36‑1 (MQ=255)                     gCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:1154917/36‑1 (MQ=255)                      cAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGc  <  1:610387/35‑1 (MQ=255)                                                        | ATTATTTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGC  >  W3110S.gb/4159710‑4159765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑