Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4176675	4176930	256	47 [0]	[0] 7	gspK	general secretory pathway component, cryptic

TTCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCA  >  W3110S.gb/4176613‑4176674                                                              | ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGTAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:14081/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:666696/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:340617/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:379324/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:432476/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:44935/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:475314/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:549661/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:583161/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:600697/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:611117/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:660772/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:661085/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:284317/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:714962/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:733585/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:77500/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:7912/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:858211/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:864741/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:873615/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:916932/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:949792/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1418685/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1090492/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1099653/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1188918/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:125837/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1275372/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1291735/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1311558/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1323778/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1416314/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1039598/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1418978/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1430158/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1432229/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1432571/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1450584/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:184531/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:185511/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:189367/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:204406/62‑1 (MQ=255) ttCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:208621/62‑1 (MQ=255)  tCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:941517/61‑1 (MQ=255)               tAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:1271405/48‑1 (MQ=255)                        ggCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCa  <  1:378549/39‑1 (MQ=255)                                                              | TTCCGTACTCAGCGTAAAATAGCGGCTATAGGGAAAGAGATGCCTTTTCACCTGAGCAACCA  >  W3110S.gb/4176613‑4176674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑