Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4180167	4180258	92	25 [3]	[0] 19	gspF	general secretory pathway component, cryptic

TAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATCAGCCAGC  >  W3110S.gb/4180105‑4180167                                                              |  tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTGATcagccag   <  1:32949/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:457453/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:988228/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:98790/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:933011/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:868955/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:731956/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:692899/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:658209/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:652206/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:579454/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:547185/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:507383/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:1040098/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:400250/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:247061/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:173974/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:148439/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:1443982/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:1154571/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:1142126/62‑1 (MQ=255) tAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccag   <  1:1043815/62‑1 (MQ=255)  aGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccagc  >  1:590993/1‑62 (MQ=255)  aGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccagc  >  1:1111142/1‑62 (MQ=255)  aGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATcagccagc  >  1:1101751/1‑62 (MQ=255)                                                              |  TAGATCAGTGACTGAATGAGCTTGCTGCGGATTTTCTGCCGGTTTTCATTGTAATCAGCCAGC  >  W3110S.gb/4180105‑4180167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑