Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4181697	4181705	9	34 [0]	[0] 36	gspE	general secretory pathway component, cryptic

TTGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAATG  >  W3110S.gb/4181635‑4181696                                                              | ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:686444/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1079352/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:313304/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:321965/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:369481/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:37314/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:420109/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:492448/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:520418/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:30883/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:689431/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:710652/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:751651/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:788134/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:837624/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:951466/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:95505/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:271154/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1170762/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1239312/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1290441/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1298607/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1300314/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:140119/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:141532/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:15303/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:178530/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:180243/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:199670/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:263774/62‑1 (MQ=255) ttGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:281806/62‑1 (MQ=255)  tGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1101292/61‑1 (MQ=255)  tGTCCGCAAAACGCCGTCGAAGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:1142951/61‑1 (MQ=255)                    gATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAAtg  <  1:493030/43‑1 (MQ=255)                                                              | TTGTCCGCAAAACGCCGTCGATGCGAAAACGGATCGACATTGTTTTTTCATAGGTTTCAATG  >  W3110S.gb/4181635‑4181696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑