Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4324398	4324691	294	59 [0]	[0] 38	phnI	carbon‑phosphorus lyase complex subunit

ATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAT  >  W3110S.gb/4324336‑4324397                                                              | aTCGAGGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:959636/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:561763/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:317822/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1014330/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:375229/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:402274/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:413438/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:41727/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:473873/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:501043/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:505232/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:510779/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:523886/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:5259/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:529576/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:342428/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:60860/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:628156/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:661572/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:682022/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:729765/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:759245/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:793681/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:848977/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:863524/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:902904/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:910861/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:98976/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:221987/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1029741/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1051628/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1077375/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1120445/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1125228/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1153478/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1160654/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1177384/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1192052/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1194330/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1210972/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1234264/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1244406/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1265438/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1276210/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:148222/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1281115/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1447437/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1389800/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1355721/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1357699/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1364547/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGGCGGCAt  <  1:274682/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGTGGGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:717258/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGGGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:657060/62‑1 (MQ=255) aTCGACGTAGTGGGGGAGTTTGAGGGGGGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1236356/62‑1 (MQ=255)  tCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:941797/61‑1 (MQ=255)  tCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:194283/61‑1 (MQ=255)   cGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:475562/60‑1 (MQ=255)                            tgAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAt  <  1:1286998/35‑1 (MQ=255)                                                              | ATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCAT  >  W3110S.gb/4324336‑4324397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑