Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4470081	4470135	55	38 [0]	[0] 5	treB	fused trehalose(maltose)‑specific enzyme IIBC component of PTS

CAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTACC  >  W3110S.gb/4470019‑4470080                                                              | cAAACGGACCAATCATCGCATGGGCGAGGAACACCGCGAGGATCAGCGATCAGACGGGTacc  <  1:1196127/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTgcc  <  1:295372/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:322802/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:952665/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:950528/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:823055/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:808487/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:70844/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:596330/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:49774/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:441990/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:410209/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:35751/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:354718/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1107063/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1216586/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1251227/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:228132/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1320907/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1322556/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1322679/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:194909/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:191403/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:160781/62‑1 (MQ=255) cAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:232706/62‑1 (MQ=255) cAAACGGACCAATCAGCGCACGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:553450/62‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1348116/61‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:336788/61‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:336455/61‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:29022/61‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:251564/61‑1 (MQ=255)  aaaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:249277/61‑1 (MQ=255)   aaCGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:504224/60‑1 (MQ=255)         ccAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:336790/54‑1 (MQ=255)          cAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:696727/53‑1 (MQ=255)            aTCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:784905/51‑1 (MQ=255)             tCAGCGCATTGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1080530/50‑1 (MQ=255)                       ggCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTacc  <  1:1287287/40‑1 (MQ=255)                                                              | CAAACGGACCAATCAGCGCATGGGCGAGGAACACCGCGAGGATCAGCGAACAGACGGGTACC  >  W3110S.gb/4470019‑4470080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑