Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4544317	4544487	171	11 [0]	[0] 34	yjhA/fimB	N‑acetylnuraminic acid outer membrane channel protein/tyrosine recombinase/inversion of on/off regulator of fimA

GTGTCTTTGGCAACCGGTAGCTGTATTTTATATTTTTTT  >  W3110S.gb/4544278‑4544316                                       | gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:1090230/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:1102567/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:1247455/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:1252644/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:180095/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:527022/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:670107/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:671835/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:842917/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:89759/39‑1 (MQ=255) gtgtCTTTGGCAACCGGTAGCTGTATTTTATAttttttt  <  1:935640/39‑1 (MQ=255)                                       | GTGTCTTTGGCAACCGGTAGCTGTATTTTATATTTTTTT  >  W3110S.gb/4544278‑4544316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑