Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	98093	98108	16	41 [0]	[0] 61	murD	UDP‑N‑acetylmuramoyl‑L‑alanine:D‑glutamate ligase

ATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACG  >  W3110S.gb/98032‑98092                                                             | aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:483936/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1009258/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:196457/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:239170/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:258321/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:278293/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:356101/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:362310/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:416727/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:445180/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1464479/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:525428/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:52772/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:635757/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:644491/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:684126/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:726952/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:915244/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:94522/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:982842/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1140762/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1015860/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1039418/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1049980/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1074445/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1098816/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1119681/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:112683/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1133264/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1139069/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1421599/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1189698/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1239379/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1296609/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1315765/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1324631/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1337462/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:1357361/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:138284/61‑1 (MQ=255) aTTAACGATTCGAAAGCGACCAACGGCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:592823/61‑1 (MQ=255)  ttAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACg  <  1:165625/60‑1 (MQ=255)                                                             | ATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACG  >  W3110S.gb/98032‑98092

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑