Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	249683	249960	278	15 [0]	[0] 6	fhiA	ECK0230:JW5811:b0229; flagellar system protein, promoterless fragment

CACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGG  >  W3110S.gb/249624‑249682                                                           | cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1151347/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1192879/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1266867/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1426291/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1428458/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:15786/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:261358/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:274064/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:369859/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:3832/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:467451/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:664621/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:744306/1‑59 (MQ=255) cACGTCATGGGCGATATCGCCGTTGTCGCTGACCCGGGTGACGATAATCGCCGCCGCgg  >  1:1393483/1‑59 (MQ=255) cACGTAATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCgg  >  1:1122353/1‑59 (MQ=255)                                                           | CACGTCATGGGCGATATCGCCGTTGTCGCTGACGCGGGTGACGATAATCGCCGCCGCGG  >  W3110S.gb/249624‑249682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑