Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	297762	298014	253	27 [0]	[0] 13	[yagQ]–[yagR]	[yagQ],[yagR]

AAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTCGCG  >  W3110S.gb/297701‑297761                                                             | aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:301975/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:957951/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:936889/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:887392/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:882291/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:868235/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:828792/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:807714/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:80109/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:560909/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:485516/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:481088/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:302748/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1028455/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:267322/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1391150/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1366536/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1351745/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1326327/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:131812/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1295108/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:115110/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1130829/61‑1 (MQ=255) aaGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1062596/61‑1 (MQ=255)  agcggcagcggcCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:895851/60‑1 (MQ=255)       cagcggcCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:1137730/55‑1 (MQ=255)          cggcCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTcgcg  <  1:233722/52‑1 (MQ=255)                                                             | AAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGTAACGACCATCTTCGCG  >  W3110S.gb/297701‑297761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑