Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	312685	312725	41	55 [0]	[0] 53	ykgM/eaeH	predicted ribosomal protein/attaching and effacing protein, pathogenesis factor

TGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTG  >  W3110S.gb/312623‑312684                                                              | tGAAGTCAGTTCCGGGTATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:250152/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCTGGCGTTGATTGGTg  >  1:136312/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:553589/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:238034/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:289004/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:334666/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:344713/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:354265/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:37874/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:425447/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:434412/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:477714/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:509720/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:530529/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:208450/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:554298/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:575025/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:65585/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:704635/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:742856/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:793231/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:830572/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:862038/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:880476/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:892457/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:945628/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:952703/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:995288/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1269369/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1053080/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1058096/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1061931/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1081755/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1112906/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1119849/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1141018/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1147652/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:115470/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1173865/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1206567/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1228705/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:102242/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1286169/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1302159/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1352878/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1376120/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1390377/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1403861/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1412948/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:1438191/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:162536/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:169441/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:175239/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:192985/1‑62 (MQ=255) tGAAGTCAGTTCCGGGAATGAGTCAGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTg  >  1:685393/1‑62 (MQ=255)                                                              | TGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTG  >  W3110S.gb/312623‑312684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑