Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	416321	416323	3	39 [0]	[0] 33	sbcD/phoB	exonuclease, dsDNA, ATP‑dependent/DNA‑binding response regulator in two‑component regulatory system with PhoR (or CreC)

ATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGA  >  W3110S.gb/416259‑416320                                                              | aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:771711/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:343852/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:373058/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:375531/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:413862/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:433127/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:452650/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:588104/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:678041/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:705494/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:259379/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:807339/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:824763/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:926043/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:92952/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:936923/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:947162/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:971830/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:982731/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1381091/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1051696/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1106856/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1129274/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1187680/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1189574/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1203822/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1212404/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:124005/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1377524/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1047525/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1390497/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1403383/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1420561/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1421447/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:1462584/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:178222/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:187105/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGa  >  1:227293/1‑62 (MQ=255) aTAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATATGACGCATAATGa  >  1:268891/1‑62 (MQ=255)                                                              | ATAACCTGAAGATATGTGCGACGAGCTTTTCATAAATCTGTCATAAATCTGACGCATAATGA  >  W3110S.gb/416259‑416320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑