Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	552894	553686	793	65 [0]	[0] 50	[lpxH]–ppiB	[lpxH],ppiB

AACACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTC  >  W3110S.gb/552832‑552893                                                              | aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:312613/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:4679/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:461847/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:453862/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:40067/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:392664/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:362101/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:328432/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:325668/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:477263/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:299129/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:256925/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:256010/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:251042/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:229350/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:193375/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1469958/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1461032/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:528523/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:548832/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:648819/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:670584/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:67908/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:693313/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:721454/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:72786/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:732157/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:764292/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:787846/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:803205/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:839473/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:915187/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:944253/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:117967/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1008956/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1020295/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1038176/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1048489/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1058173/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1058882/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:10622/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1071658/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1092892/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1118616/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1119965/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1157869/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1160040/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1161239/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1163912/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1005805/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1198925/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1246221/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1255172/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:12862/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1297623/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1310829/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1324731/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:134981/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1361704/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1370734/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:139318/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1403876/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1405409/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1409157/1‑62 (MQ=255) aaCACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTc  >  1:1456179/1‑62 (MQ=255)                                                              | AACACCCGGCGACCATAAAGTTCGAGCACCTTTTCTTCCGGCAATAACGTCATGCCACTTTC  >  W3110S.gb/552832‑552893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑