Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	557935	558007	73	63 [0]	[0] 51	[sfmA]	[sfmA]

GGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGG  >  W3110S.gb/557873‑557934                                                              | gggACCAACGTTCTTCATTTTTCTGCATGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:426491/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:716013/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:403652/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:405899/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:411793/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:412542/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:462970/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:467875/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:499606/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:577924/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:622306/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:625253/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:636328/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:672237/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:69209/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:693274/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:388475/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:72105/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:766546/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:77171/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:794272/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:809971/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:837498/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:851072/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:863774/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:891666/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:892339/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:904879/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:926585/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:941379/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:957294/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:963001/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1295485/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1106524/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1107685/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1114759/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1125905/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1160599/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1175710/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1176490/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1197872/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1206231/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1207935/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1223023/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1225370/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1227566/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:127655/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1282483/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1078032/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1305988/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1307162/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1364183/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1454635/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:1472270/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:164400/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:233999/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:274827/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:300815/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:332212/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:333817/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:343882/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:355795/62‑1 (MQ=255) gggACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAgg  <  1:362402/62‑1 (MQ=255)                                                              | GGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGG  >  W3110S.gb/557873‑557934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑