Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	705508	705536	29	41 [0]	[0] 13	nagE	fused N‑acetyl glucosamine specific PTS enzyme IICBA components

ATGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGC  >  W3110S.gb/705446‑705507                                                              | aTGTTCAACCTTAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:269186/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:592640/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:473495/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:528942/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:541837/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:548606/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:555082/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:55653/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:559780/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:583695/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1084367/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:610667/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:691889/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:718214/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:72483/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:826560/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:89996/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:939726/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:9896/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1129162/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:395060/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:361621/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:320875/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:307700/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:260321/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:258258/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:151151/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1103351/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1311627/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1257754/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1222758/62‑1 (MQ=255) aTGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1129598/62‑1 (MQ=255) aTGTTCAACCTCAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:111965/62‑1 (MQ=255)  tGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGAGGAGATCGTTACTGAAGAAGc  <  1:1009495/61‑1 (MQ=255)  tGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:997620/61‑1 (MQ=255)  tGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:432569/61‑1 (MQ=255)  tGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:1415681/61‑1 (MQ=255)  tGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:419769/61‑1 (MQ=255)   gTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:760239/60‑1 (MQ=255)   gTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:56416/60‑1 (MQ=255)     tCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGc  <  1:860784/58‑1 (MQ=255)                                                              | ATGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGC  >  W3110S.gb/705446‑705507

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑