Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1131844	1132176	333	24 [0]	[0] 29	flgA	assembly protein for flagellar basal‑body periplasmic P ring

AGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAC  >  W3110S.gb/1131785‑1131843                                                           | aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGATTACCTGTCCCGATAc  <  1:805766/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:419364/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:976976/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:862476/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:856294/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:8525/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:843184/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:756552/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:539863/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:538258/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1001096/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:342008/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:247948/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:228473/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1401219/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1315023/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1286102/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1119959/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1039215/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:102913/59‑1 (MQ=255) aGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1018001/59‑1 (MQ=255)  ggTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:620315/58‑1 (MQ=255)  ggTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:684243/58‑1 (MQ=255)  ggTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAc  <  1:1364457/58‑1 (MQ=255)                                                           | AGGTTTATAAGAATATTCCCATCTGCATCAACAACGCCGCTGACTACCTGTCCCGATAC  >  W3110S.gb/1131785‑1131843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑