Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1160626	1160639	14	26 [0]	[0] 21	ptsG	fused glucose‑specific PTS enzyme IIBC components

CGTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCAA  >  W3110S.gb/1160564‑1160625                                                              | cgTGCTGATTAAAGCACTGTATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1214775/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGTATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:636866/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1161855/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:81842/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:802202/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:788725/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:746297/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:589238/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:524015/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:425794/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:358607/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:234727/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:172169/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1339772/62‑1 (MQ=255) cgTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1276428/62‑1 (MQ=255)   tGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1315712/60‑1 (MQ=255)                   ggATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:469689/44‑1 (MQ=255)                   ggATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1123760/44‑1 (MQ=255)                    gATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1406941/43‑1 (MQ=255)                     aTCTTAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:740608/42‑1 (MQ=255)                     aTCTGAAAACGCCGGGTCGTGAAGACGCGACTGAATATGCaa  <  1:1395591/42‑1 (MQ=255)                     aTCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:932262/42‑1 (MQ=255)                        tGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:409386/39‑1 (MQ=255)                          aaaaCGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:1365466/37‑1 (MQ=255)                           aaaCGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:667325/36‑1 (MQ=255)                           aaaCGCCGGGTCGTGAAGACGCGACTGAAGATGCaa  <  1:748532/36‑1 (MQ=255)                                                              | CGTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCAA  >  W3110S.gb/1160564‑1160625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑