Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1241629	1242137	509	15 [0]	[0] 32	[cvrA]	[cvrA]

AAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCC  >  W3110S.gb/1241568‑1241628                                                             | aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:1285852/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:1421786/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:1422907/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:240448/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:25326/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:272714/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:293782/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:405364/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:516104/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:571782/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:57718/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:670753/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:86378/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:984277/61‑1 (MQ=255) aaaaaaTCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGccc  <  1:995129/61‑1 (MQ=255)                                                             | AAAAAATCATCCATCCGGCTGGTCAGCAACTGTAGTTGTTAATGTGACAGAGCCATTGCCC  >  W3110S.gb/1241568‑1241628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑