Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1242693	1242752	60	61 [0]	[0] 47	cvrA	predicted cation/proton antiporter

TCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCA  >  W3110S.gb/1242654‑1242692                                       | tCACGCAGATTGAAACCGCTGAAGGGGAGCAATCCAGCa  >  1:1198579/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:726226/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:456936/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:459570/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:500153/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:518389/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:519200/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:532524/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:535403/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:546494/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:590585/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:60266/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:608188/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:620193/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:625631/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:693767/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:711550/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:299826/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:727495/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:739311/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:741092/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:771283/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:810637/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:826341/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:84907/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:877474/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:881219/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:922217/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:930917/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:956818/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:970899/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1413433/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1015320/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1030530/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1113982/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1155285/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1173274/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1189122/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1211879/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1247620/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1293570/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1336523/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1349073/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1384955/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1404522/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1410343/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:309886/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1416127/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1417727/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1421331/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1426563/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1428311/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1446050/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1471706/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:190775/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:197354/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:200785/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:242544/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:252566/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:2953/1‑39 (MQ=255) tCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCa  >  1:1009468/1‑39 (MQ=255)                                       | TCACGCAGATTGAAACCGCGGAAGGGGAGCAATCCAGCA  >  W3110S.gb/1242654‑1242692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑