Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1245840	1245971	132	18 [0]	[0] 15	ycgR	protein involved in flagellar function

CCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTA  >  W3110S.gb/1245778‑1245839                                                              | ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:183833/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:916715/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:835895/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:646951/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:565265/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:429528/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:413578/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:375606/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:246549/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1026181/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1366427/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1238842/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1220983/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1207400/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1194546/62‑1 (MQ=255) ccATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1099703/62‑1 (MQ=255)  cATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1199997/61‑1 (MQ=255)                  gtacggtaATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTa  <  1:1203461/45‑1 (MQ=255)                                                              | CCATAAGGTGGGAGGCGGTACGGTAATAAATGCCGGAAGCTGCAAGTATTCACTCTGCTGTA  >  W3110S.gb/1245778‑1245839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑