Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1269020	1269192	173	38 [0]	[0] 21	ychA	predicted transcriptional regulator

CTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGTCTC  >  W3110S.gb/1268958‑1269019                                                              | catGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:537793/3‑62 (MQ=255) cTTGCTAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:202422/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGGTTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:49434/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:766651/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:515274/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:530054/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:551086/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:629203/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:63750/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:675133/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:500199/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:766737/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:79688/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:809763/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:895058/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:937929/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:971431/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:986698/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:991755/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:999614/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1415547/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:103967/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1054008/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1235353/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1258156/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1263940/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1307560/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:130774/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1402328/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:506923/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:148606/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:167414/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:182768/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:206759/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:210079/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:215040/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:424046/1‑62 (MQ=255) cTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGtctc  >  1:1015947/1‑62 (MQ=255)                                                              | CTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGTCTC  >  W3110S.gb/1268958‑1269019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑