Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1528914	1529122	209	27 [0]	[0] 13	yncH/rhsE	hypothetical protein/rhsE element core protein RshE

CGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAC  >  W3110S.gb/1528852‑1528913                                                              | cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:408421/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:989969/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:977965/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:952655/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:943992/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:922922/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:81259/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:57606/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:567327/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:536485/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:519751/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1012447/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:397324/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:242885/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:191244/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1407265/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1309458/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1190398/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1166439/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1164113/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1137710/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1088346/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:1055249/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTACCTGTAGGAc  <  1:53164/62‑1 (MQ=255) cGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTAGCAATTATCAGTAGGAc  <  1:766293/62‑1 (MQ=255) cGGAAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:297531/62‑1 (MQ=255)  ggCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAc  <  1:502739/61‑1 (MQ=255)                                                              | CGGCAGGTATGCTAAAAGGATAAATGGCGTTCTCTGTATTTATTCGCAATTATCTGTAGGAC  >  W3110S.gb/1528852‑1528913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑