Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1607342	1607401	60	31 [1]	[0] 16	lsrB	AI2 transporter

GAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTGGC  >  W3110S.gb/1607281‑1607343                                                             |   gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1135234/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:997504/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:98789/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:901004/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:8325/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:76259/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:723004/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:68870/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:673919/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:665758/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:66315/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:462621/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:342303/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:276336/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1421830/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1106931/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1180275/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1277739/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1324397/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1326189/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1369857/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:248342/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1447125/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1468939/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:1469435/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:152406/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:164146/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTAACTACGCAGTTTg    >  1:626830/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCT‑GGAAATTGTCACTACGCAGTTTGGc  >  1:828926/1‑62 (MQ=255) gaagCGAAAGCGAAAATCGCCAAAGAACATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:319998/1‑61 (MQ=255) gaagCGAAAGCGAAAATCGACAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTg    >  1:862573/1‑61 (MQ=255)                                                             |   GAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTGGC  >  W3110S.gb/1607281‑1607343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑