Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1661290	1662041	752	55 [0]	[0] 28	ynfE	oxidoreductase subunit

ATCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCG  >  W3110S.gb/1661229‑1661289                                                             | aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGTAATGATTGTGGTCATCg  <  1:139632/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:413718/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:157061/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:173700/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:198843/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:298685/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:331674/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:335068/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:345269/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:372963/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:375040/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:384011/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:402494/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:404635/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1432129/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:499240/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:63987/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:644381/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:648607/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:690696/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:729241/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:757801/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:797695/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:805959/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:849586/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:896197/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:923901/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:978038/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1199256/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1016441/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1021911/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1064447/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1102622/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1133002/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1138909/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1155044/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1155638/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1169438/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1181870/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1196882/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1436953/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1209027/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1222989/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:125252/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1262672/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1274509/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1289354/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1304865/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1361038/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1366060/61‑1 (MQ=255) aTCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1008535/61‑1 (MQ=255)  tCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1231342/60‑1 (MQ=255)  tCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCg  <  1:1077908/60‑1 (MQ=255)             cATGAAATTCTGCAGGACGAATCGAAATTCTAAATGATTGTGGTCATCg  <  1:1331346/49‑1 (MQ=255)                gAAATTCTGCAGGACGAATCGAAATGCTAAATGATTGTGGTCATCg  <  1:1065880/46‑1 (MQ=255)                                                             | ATCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCG  >  W3110S.gb/1661229‑1661289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑