Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1690101	1690362	262	54 [0]	[0] 9	[manA]	[manA]

TCATCTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTTCTCTC  >  W3110S.gb/1690039‑1690100                                                              | tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:467056/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:228387/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:243172/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1033205/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:34266/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:349214/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:357639/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:401167/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:414440/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:421756/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:440850/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:459717/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:103567/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:472596/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:475062/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:504285/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:515456/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:687673/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:716623/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:775305/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:786504/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:809123/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:818728/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:841356/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:183041/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1116083/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1116563/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1127983/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:113238/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1153696/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1185242/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1193247/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:125354/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1253833/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:126239/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1280024/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1293529/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1297783/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:929143/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1331321/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:13378/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1350663/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1373200/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:169944/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:17796/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:190226/62‑1 (MQ=255) tcatcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGGTTGTTTGACATTGTtctctc  <  1:869196/62‑1 (MQ=255)  catcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:889104/61‑1 (MQ=255)  catcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:942799/61‑1 (MQ=255)  catcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:268902/61‑1 (MQ=255)  catcTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:269400/61‑1 (MQ=255)                ggAAAAGGAGCCTGATAATGAAAGGGATTGTTTGACATTGTtctctc  <  1:1062348/47‑1 (MQ=255)                     aGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:1310102/42‑1 (MQ=255)                     aGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTtctctc  <  1:944416/42‑1 (MQ=255)                                                              | TCATCTTTTTTGAGTGGAAAAGGAGCCTGATAATGAAAGGGTTTGTTTGACATTGTTCTCTC  >  W3110S.gb/1690039‑1690100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑