Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1746939	1746979	41	68 [0]	[0] 31	ydhQ	conserved hypothetical protein

CTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGATTG  >  W3110S.gb/1746878‑1746938                                                             | cTTTTACCGTACTGCCGTCTAGAATCAACACACCTCCCTGCTGTACAGTAATCGTTGAttg  <  1:1376359/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:482511/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:677724/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:591262/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:556392/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:554276/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:542238/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:509356/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:497065/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:743728/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:478448/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:458230/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:426315/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:408791/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:393690/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:383192/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1014001/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:336506/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:7464/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:771607/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:77278/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:817120/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:818750/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:82048/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:828854/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:90020/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:904714/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:912238/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:919834/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:935139/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:966790/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:98145/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:988863/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1119669/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:330067/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1305771/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1283954/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1232600/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1221254/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1167678/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1148035/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1130150/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:131688/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1113940/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1077008/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1061464/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1058015/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1029814/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1025909/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1024361/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:149454/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:297753/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:276/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:249366/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:16984/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:168549/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:168166/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1470396/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1456764/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1454014/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1443752/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1374595/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1352709/61‑1 (MQ=255) cTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:1336162/61‑1 (MQ=255)         gTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:693267/53‑1 (MQ=255)                    tAGAATCAAAACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:164445/42‑1 (MQ=255)                       aaTCAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:933286/39‑1 (MQ=255)                          cAACACACCGCCCTGCTGTACAGTAATCGTTGAttg  <  1:864751/36‑1 (MQ=255)                                                             | CTTTTACCGTACTGCCGTCTAGAATCAACACACCGCCCTGCTGTACAGTAATCGTTGATTG  >  W3110S.gb/1746878‑1746938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑