Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1973974	1974355	382	34 [0]	[0] 59	tar	methyl‑accepting chemotaxis protein II

AACGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTATT  >  W3110S.gb/1973912‑1973973                                                              | aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:696611/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:386897/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:412567/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:43063/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:475505/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:48182/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:549109/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:564758/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:567083/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:319182/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:734082/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:736210/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:743098/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:764714/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:879601/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:9349/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:995057/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1338861/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1014257/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1028656/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1107236/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1139510/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:119744/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1220810/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1282535/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1324419/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1012869/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1338885/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1439287/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:1439707/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:242094/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:258834/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:263288/1‑62 (MQ=255) aaCGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTAtt  >  1:312265/1‑62 (MQ=255)                                                              | AACGCTTCGCCCATTGCATTTTGCATTCCCTGGGTTGGCTGAGCGAAATAAGCTCCAGTATT  >  W3110S.gb/1973912‑1973973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑