Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1978863	1981407	2545	25 [0]	[0] 44	flhC–insH	flhC,flhD,insH

TAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACATCATC  >  W3110S.gb/1978801‑1978862                                                              | tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:335591/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:976250/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:922369/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:888479/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:838140/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:819395/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:805584/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:794237/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:784374/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:707406/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:679871/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:645156/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:420842/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1004542/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:304155/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:241618/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:142146/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1410600/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1409968/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1220377/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1169409/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1130636/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1107640/62‑1 (MQ=255) tAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:1030350/62‑1 (MQ=255)     cgccgAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACatcatc  <  1:286964/58‑1 (MQ=255)                                                              | TAACCGCCGAAAACTGTACCGAGAACAACCAGGTAACCTAATAAGATAAGCACGACATCATC  >  W3110S.gb/1978801‑1978862

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑