Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2005257	2005360	104	26 [0]	[0] 36	fliC	flagellar filament structural protein

CTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCAA  >  W3110S.gb/2005203‑2005256                                                      | cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:43345/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:960213/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:947397/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:905195/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:818232/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:782545/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:724942/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:678053/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:656765/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:653670/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:520700/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:479054/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:455692/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:1058081/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:428268/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:394170/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:340179/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:305540/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:208755/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:193211/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:163307/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:1430804/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:142206/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:1355316/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:1301911/1‑54 (MQ=255) cTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCaa  >  1:1117495/1‑54 (MQ=255)                                                      | CTGTATCGTTATTTTTAACGCTAAAACCATCAAGGCCAAGAGTTTTAGCATCAA  >  W3110S.gb/2005203‑2005256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑