Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2007207	2007292	86	44 [0]	[0] 13	fliD	flagellar filament capping protein

GATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGA  >  W3110S.gb/2007146‑2007206                                                             | gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:53570/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:238328/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:249076/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:286215/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:315705/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:324220/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:385694/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:417064/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:418685/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:462612/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:534029/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:197128/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:612222/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:679400/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:689884/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:727145/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:757496/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:804057/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:821725/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:871754/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:890642/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:93649/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1190381/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:103501/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1044778/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1045623/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1055794/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1105614/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1114904/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1118214/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1124553/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:113828/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1175604/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1028031/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1203657/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1270995/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1294383/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1315070/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1399776/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:142568/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:143816/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1440004/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1461562/61‑1 (MQ=255) gATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGa  <  1:1464402/61‑1 (MQ=255)                                                             | GATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGA  >  W3110S.gb/2007146‑2007206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑