Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2022690	2022833	144	56 [0]	[0] 48	fliM	flagellar motor switching and energizing component

CGCTTCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAACC  >  W3110S.gb/2022629‑2022689                                                             | tgCTTCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:851386/60‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTTGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1351755/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCTCGTCATCAAcc  <  1:1170384/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:688893/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:423652/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:428845/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:461605/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:47944/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:546206/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:582099/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:589918/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:594944/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:628777/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:652747/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:670427/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:67891/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:6884/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1025666/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:71182/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:726724/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:728458/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:755667/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:862873/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:871887/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:882902/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:886208/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:912881/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:923997/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:149084/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1101590/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1144035/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1171902/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1238922/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1244882/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1271919/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1091828/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1295725/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1353293/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1369943/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:142209/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:1424843/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:169543/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:182851/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:201958/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:206369/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:213909/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:223264/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:23473/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:237799/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:101344/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:307782/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:371662/57‑1 (MQ=255)     tCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGGCATCAAcc  <  1:942318/57‑1 (MQ=255)      cccGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:336213/56‑1 (MQ=255)            cAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:466889/50‑1 (MQ=255)              aaGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAAcc  <  1:747456/48‑1 (MQ=255)                                                             | CGCTTCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAACC  >  W3110S.gb/2022629‑2022689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑